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Energy Landscape Library (ELL):
The ELL-library provides a platform for generic algorithms to study
kinetics and structure of energy landscapes with discrete states. These
algorithms need an abstract representation of these states to be applied
to a multitude of state instances and their corresponding energy or
fitness landscapes.
The library provides a pool of basic methods and already implemented
states for biomolecules like RNA or lattice proteins.
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Constraint-based Protein Structure Prediction (CPSP) tools package:
This C++ programming library provides a fast and easyly extensible
implementation of the constraint-based approach of Rolf Backofen and
Sebastian Will to predict proven optimal structures of simplified
3D-lattice proteins in the HP-model.
Furthermore it collects additional tools concering HP-sequences and
lattice-protein structures like sequence design, neutral net expansion,
etc.
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